This page lists channels that provide packages for scientific and high-performance computing (HPC).

  • High-performance computing packages at InriaContinuous integration badge.
    channel configuration...
    To use the guix-hpc channel, add these lines to ~/.config/guix/channels.scm:
    (channel
      (name 'guix-hpc)
      (url "https://gitlab.inria.fr/guix-hpc/guix-hpc"))
    
    substitute configuration...
    To obtain substitutes (pre-built binaries) for packages in this channel, add https://guix.bordeaux.inria.fr and authorize this key:
    (public-key
     (ecc
      (curve Ed25519)
      (q #89FBA276A976A8DE2A69774771A92C8C879E0F24614AAAAE23119608707B3F06#)))
    More info.
  • Providing old package versionsContinuous integration badge.
    channel configuration...
    To use the guix-past channel, add these lines to ~/.config/guix/channels.scm:
    (channel
      (name 'guix-past)
      (url "https://gitlab.inria.fr/guix-hpc/guix-past")
      (introduction
        (make-channel-introduction
          "0c119db2ea86a389769f4d2b9c6f5c41c027e336"
          (openpgp-fingerprint
            "3CE4 6455 8A84 FDC6 9DB4  0CFB 090B 1199 3D9A EBB5"))))
    
    substitute configuration...
    To obtain substitutes (pre-built binaries) for packages in this channel, add https://guix.bordeaux.inria.fr and authorize this key:
    (public-key
     (ecc
      (curve Ed25519)
      (q #89FBA276A976A8DE2A69774771A92C8C879E0F24614AAAAE23119608707B3F06#)))
    More info.
  • General scientific and statistics packagesContinuous integration badge.
    channel configuration...
    To use the guix-science channel, add these lines to ~/.config/guix/channels.scm:
    (channel
      (name 'guix-science)
      (url "https://github.com/guix-science/guix-science")
      (introduction
        (make-channel-introduction
          "b1fe5aaff3ab48e798a4cce02f0212bc91f423dc"
          (openpgp-fingerprint
            "CA4F 8CF4 37D7 478F DA05  5FD4 4213 7701 1A37 8446"))))
    
    substitute configuration...
    To obtain substitutes (pre-built binaries) for packages in this channel, add https://guix.bordeaux.inria.fr and authorize this key:
    (public-key
     (ecc
      (curve Ed25519)
      (q #89FBA276A976A8DE2A69774771A92C8C879E0F24614AAAAE23119608707B3F06#)))
    More info.
  • Bioinformatics tools and package variants used at the Berlin Institute for Medical Systems Biology of the Max Delbrück Center for Molecular Medicine
    channel configuration...
    To use the guix-bimsb channel, add these lines to ~/.config/guix/channels.scm:
    (channel
      (name 'guix-bimsb)
      (url "https://github.com/BIMSBbioinfo/guix-bimsb"))
    
  • Bioinformatics and HPC packages used by Genenetwork at the University of Tennessee
    channel configuration...
    To use the guix-bioinformatics channel, add these lines to ~/.config/guix/channels.scm:
    (channel
      (name 'guix-bioinformatics)
      (url "https://gitlab.com/genenetwork/guix-bioinformatics"))
    
  • Bioinformatics packages used at the Center for Molecular Medicine at UMC Utrecht
    channel configuration...
    To use the guix-additions channel, add these lines to ~/.config/guix/channels.scm:
    (channel
      (name 'guix-additions)
      (url "https://github.com/UMCUGenetics/guix-additions"))
    
  • Packages for bioinformatics and genomics used at UTHSC.
    channel configuration...
    To use the guix-genomics channel, add these lines to ~/.config/guix/channels.scm:
    (channel
      (name 'guix-genomics)
      (url "https://github.com/ekg/guix-genomics"))
    
  • Packages in use at the Leibniz Institute for Psychology Information.
    channel configuration...
    To use the guix-zpid channel, add these lines to ~/.config/guix/channels.scm:
    (channel
      (name 'guix-zpid)
      (url "https://github.com/leibniz-psychology/guix-zpid"))
    

Want to have your channel listed here? Please email guix-science@gnu.org details about your channel.

  • MDC
  • Inria
  • UBC
  • UTHSC